CRAN Package Check Results for Package PKPDsim

Last updated on 2024-08-07 00:49:23 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.0 57.80 478.84 536.64 ERROR
r-devel-linux-x86_64-debian-gcc 1.3.0 38.38 338.10 376.48 ERROR
r-devel-linux-x86_64-fedora-clang 1.3.0 959.07 ERROR
r-devel-linux-x86_64-fedora-gcc 1.3.0 1112.66 ERROR
r-devel-windows-x86_64 1.3.0 65.00 560.00 625.00 ERROR
r-patched-linux-x86_64 1.3.0 58.42 462.81 521.23 ERROR
r-release-linux-x86_64 1.3.0 54.92 463.02 517.94 ERROR
r-release-macos-arm64 1.3.0 231.00 OK
r-release-macos-x86_64 1.3.0 378.00 OK
r-release-windows-x86_64 1.3.0 66.00 564.00 630.00 ERROR
r-oldrel-macos-arm64 1.3.0 285.00 OK
r-oldrel-macos-x86_64 1.3.0 455.00 OK
r-oldrel-windows-x86_64 1.3.0 78.00 701.00 779.00 ERROR

Check Details

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [194s/244s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [138s/177s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.0
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘BH’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [341s/430s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [412s/537s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [215s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [190s/240s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [189s/231s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [214s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [275s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64