Analysis of Oceanographic Data

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Documentation for package ‘oce’ version 1.8-2

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A B C D E F G H I J L M N O P R S T U V W X misc

-- A --

abbreviateTimeLabels Abbreviate a Vector of Times by Removing Commonalities
ad2cpCodeToName Map AD2CP ID Code to oce Name
ad2cpHeaderValue Infer an Item From a Nortek AD2CP File Header
addSpine Add a Spine to a section Object
adp Sample adp Data
adp-class Class to Store Acoustic-Doppler Profiler Data
adpAd2cpFileTrim Trim an AD2CP File
adpConvertRawToNumeric Convert Raw to Numeric Values in an adp Object
adpEnsembleAverage Ensemble Average an adp Object in Time
adpFlagPastBoundary Flag adp Data Past Water Column Boundary
adpRdiFileTrim Trim an RDI adp File
adp_rdi.000 Sample adp File in RDI Format
adv Sample adv Data
adv-class Class to Store Acoustic-Doppler Velocimeter Data
advSontekAdrFileTrim Trim a Sontek ADR adv File
airRho Air Density
amsr Sample amsr Data (Near Nova Scotia)
amsr-class Class to Store AMSR-2 Satellite Data
angle2hms Convert Astronomical Angle in Degrees to Hours, Minutes and Seconds
angleRemap Convert Angle From 0:360 to -180:180 Convention
applyMagneticDeclination Alter an Object to Account for Magnetic Declination (Generic)
applyMagneticDeclination-method Alter an adp Object to Account for Magnetic Declination
applyMagneticDeclination-method Alter an adv Object to Account for Magnetic Declination
applyMagneticDeclination-method Alter a cm Object to Account for Magnetic Declination
applyMagneticDeclination-method Alter an Object to Account for Magnetic Declination
approx3d Trilinear Interpolation in a 3D Array
argo Sample argo Data
argo-class Class to Store Argo Profiler Data
argoGrid Grid Argo Float Data
argoJuldToTime Convert Argo Julian Day to R Time
argoNames2oceNames Convert Argo Data Name to Oce Name
argShow Show a Function Argument
as.adp Create an adp Object
as.argo Coerce Data Into an argo Object
as.cm Coerce Data Into a cm Object
as.coastline Coerce Data Into a coastline Object
as.ctd Coerce Data Into a ctd Object
as.echosounder Coerce Data Into an echosounder Object
as.gps Coerce Data Into a gps Object
as.ladp Coerce Data Into an ladp object
as.lisst Coerce Data Into a lisst Object
as.lobo Coerce Data Into a lobo Object
as.met Coerce Data Into a met Object
as.oce Coerce Something Into an oce Object
as.rsk Coerce Data Into a rsk Object
as.sealevel Coerce Data Into a sealevel Object
as.section Create a Section
as.tidem Create tidem Object From Fitted Harmonic Data
as.topo Coerce Data Into a topo Object
as.unit Convert a String to a Unit
as.windrose Create a windrose Object
as.xbt Create an xbt Object

-- B --

bcdToInteger Convert a BCD Value to an Integer Value
beamName Get Names of Acoustic-Doppler Beams
beamToXyz Change the Coordinate System in an adv or adp Object
beamToXyzAdp Convert adp Object From Beam to XYZ Coordinates
beamToXyzAdpAD2CP Convert From Beam to XYZ Coordinates (AD2CP adp Data)
beamToXyzAdv Convert adv Object from Beam Coordinates to XYZ Coordinates
beamUnspreadAdp Adjust adp Object to Account for Spherical Spreading
bilinearInterp Bilinear Interpolation Within a Grid
binApply1D Apply a Function to Vector Data
binApply2D Apply a Function to Matrix Data
binAverage Bin-average a Vector y, Based on x Values
binCount1D Bin-count Vector Data
binCount2D Bin-count Matrix Data
binmapAdp Bin-map an adp Object
binMean1D Bin-average f=f(x)
binMean2D Bin-average f=f(x,y)
bound125 Calculate a Bound, Rounded up to Mantissa 1, 2, or 5
bremen-class Class to Store Bremen-formatted Data
byteToBinary Format Bytes as Binary (Defunct)

-- C --

cm Sample cm Data
cm-class Class to Store Current Meter Data
cnvName2oceName Infer Variable Name, Units and Scale From a Seabird Header
coastline-class Class to Store Coastline Data
coastlineBest Find the Name of the Best Coastline Object
coastlineCut Cut a Coastline Object at Specified Longitude
coastlineWorld Sample coastline Data (Global, at 1:110M scale)
colormap Calculate a Color Map
colormapGMT Create a GMT-type (CPT) Colormap
composite Create a Composite Object by Averaging Across Good Data
composite-method Create a Composite of amsr Satellite Data
composite-method Composite by Averaging Across Data
computableWaterProperties Determine Available Derived Water Properties
concatenate Concatenate oce Objects (Generic)
concatenate-method Concatenate adp Objects
concatenate-method Concatenate a List of oce Objects
concatenate-method Concatenate oce Objects (oce-Specific)
coriolis Coriolis Parameter on the Earth
ctd Sample ctd Data
ctd-class Class to Store CTD (or general hydrographic) Data
ctd.cnv.gz Sample ctd File in .cnv Format
ctdDecimate Decimate a ctd Profile
ctdFindProfiles Find Profiles Within a Tow-Yow ctd Record
ctdFindProfilesRBR Find Profiles Within a ctd Object Read From a RBR File
ctdRaw Sample ctd Data, Not Trimmed of Extraneous Data
ctdRepair Repair a Malformed ctd Object
ctdTrim Trim Beginning and Ending of a CTD cast
ctd_aml.csv.gz Sample ctd File in aml Format
CTD_BCD2014666_008_1_DN.ODF.gz Sample ctd File in .odf Format
ctimeToSeconds Interpret a Character String as a Time Interval
curl Curl of 2D Vector Field

-- D --

d200321-001.ctd.gz Sample ctd File in .ctd Format
d201211_0011.cnv.gz Sample ctd File in .cnv Format
dataLabel Associate Data Names With Units
decimate Smooth and Decimate, or Subsample, an oce Object
decodeHeaderNortek Decode a Nortek Header
decodeTime Oce Version of as.POSIXct
defaultFlags Suggest a Default Flag Vector for Bad or Suspicious Data
despike Remove Spikes From a Time Series
detrend Detrend a Set of Observations
download.amsr Download and Cache an amsr File
download.coastline Download a coastline File
download.met Download and Cache a met File
download.topo Download and Cache a topo File
drawDirectionField Draw a Direction Field
drawIsopycnals Add Isopycnal Curves to a TS Plot
drawPalette Draw a Palette, Leaving Margins Suitable for an Accompanying Plot

-- E --

echosounder Sample echosounder Data
echosounder-class Class to Store Echosounder Data
eclipticalToEquatorial Convert Ecliptical Coordinate to Equatorial Coordinate
enuToOther Rotate Acoustic-Doppler Data to a New Coordinate System
enuToOtherAdp Convert adp Object from ENU Coordinate to Rotated Coordinate
enuToOtherAdv Convert ENU to Other Coordinate
equatorialToLocalHorizontal Convert Equatorial Coordinate to Local Horizontal Coordinate
errorbars Draw Error Bars on an Existing xy Diagram

-- F --

fillGap Fill a Gap in an oce Object
findBottom Find the Ocean Bottom in an Echosounder Object
firstFinite Get First Finite Value in a Vector or Array.
formatCI Format a Confidence Interval
formatPosition Format Geographical Position in Degrees and Minutes
fullFilename Full Name of File, Including Path

-- G --

g1sst-class Class to Store G1SST Satellite/Model Data
gappyIndex Create a Possibly Gappy Indexing Vector
geodDist Compute Geodesic Distance on Surface of Earth
geodGc Great-circle Segments Between Points on Earth
geodXy Convert From Geographical to Geodesic Coordinates
geodXyInverse Inverse Geodesic Calculation
GMTOffsetFromTz Determine Time Offset From Timezone
gps-class Class to Store GPS Data
grad Calculate Matrix Gradient
gravity Acceleration Due to Earth Gravity

-- H --

handleFlags Handle Flags in oce Objects (Generic)
handleFlags-method Handle Flags in adp Objects
handleFlags-method Handle Flags in argo Objects
handleFlags-method Handle Flags in ctd Objects
handleFlags-method Handle Flags in oce Objects
handleFlags-method Handle flags in section Objects
handleFlags-method Signal Erroneous Application to non-oce Objects
handleFlags.argo Handle Flags in argo Objects
handleFlags.section Handle flags in section Objects
handleFlagsInternal Low-Level Function for Handling Data-Quality Flags
head.oce Extract The Start of an Oce Object

-- I --

imagep Plot an Image with a Color Palette
initialize-method Initialize Storage for a ctd Object
initialize.ctd Initialize Storage for a ctd Object
initializeFlags Create and Initialize oce Flags
initializeFlags-method Create and Initialize adp Flags
initializeFlags-method Create and Initialize oce Flags
initializeFlagScheme Establish a Data-Quality Scheme for a oce Object
initializeFlagScheme-method Establish a Data-Quality Scheme for a ctd Object
initializeFlagScheme-method Establish a Data-Quality Scheme for a oce Object
initializeFlagScheme-method Establish a Data-Quality Scheme for a section Object
initializeFlagSchemeInternal Establish a Data-Quality Scheme for a oce Object
initializeFlagsInternal Create and Initialize oce Flags
integerToAscii Infer ASCII Code From an Integer Value
integrateTrapezoid Trapezoidal Integration
interpBarnes Grid Data Using the Barnes Algorithm
is.ad2cp Test Whether Item is a ad2cp-Type adp Object

-- J --

julianCenturyAnomaly Convert Julian-Day-Number to Julian Century
julianDay Convert a Time to a Julian Day

-- L --

labelWithUnit Create Label With Unit
ladp-class Class to Store Lowered-adp Data
landsat Sample landsat Data
landsat-class Class to Store Landsat Satellite Data
landsatAdd Add a Band to a landsat Object
landsatTrim Trim a landsat Image to a Geographical Region
latFormat Format a Latitude
latlonFormat Format a Latitude-Longitude Pair
lisst Sample lisst Data
lisst-class Class to Store LISST Data
lobo Sample lobo Data
lobo-class Class to Store LOBO Data
locationForGsw Alter Longitude and Latitude for gsw Computations
lon360 Change Longitude From -180:180 to 0:360 Convention
lonFormat Format a Longitude
longitudeTighten Try to Reduce Section Longitude Range
lonlat2map Convert Longitude and Latitude to X and Y
lonlat2utm Convert Longitude and Latitude to UTM
lookWithin Look Within the First Element of a List for Replacement Values
lowpass Lowpass Digital Filtering

-- M --

magneticField Earth Magnetic Declination, Inclination, and Intensity
makeFilter Make a Digital Filter
map2lonlat Convert X and Y to Longitude and Latitude
mapArrows Add Arrows to a Map
mapAxis Add Axis Labels to an Existing Map
mapContour Add Contours on a Existing map
mapCoordinateSystem Draw a Coordinate System
mapDirectionField Add a Direction Field to an Existing Map
mapGrid Add a Longitude and Latitude Grid to an Existing Map
mapImage Add an Image to a Map
mapLines Add Lines to a Map
mapLocator Locate Points on a Map
mapLongitudeLatitudeXY Convert From Longitude and Latitude to X and Y
mapPlot Draw a Map
mapPoints Add Points to a Map
mapPolygon Add a Polygon to a Map
mapScalebar Add a Scalebar to a Map
mapText Add Text to a Map
mapTissot Add Tissot Indicatrices to a Map
matchBytes Locate Byte Sequences in a Raw Vector
matrixShiftLongitude Rearrange Areal Matrix so Greenwich is Near the Centre
matrixSmooth Smooth a Matrix
met Sample met Data
met-class Class to Store Meteorological Data
metNames2oceNames Convert met Data Name to oce Name
moonAngle Lunar Angle as Function of Space and Time

-- N --

numberAsHMS Convert a Numeric Time to Hour, Minute, and Second
numberAsPOSIXct Convert a Numeric Time to a POSIXct Time

-- O --

oce-class Base Class for oce Objects
oce-defunct Deprecated and Defunct Elements of the oce Package
oce-deprecated Deprecated and Defunct Elements of the oce Package
oce.approx Interpolate 1D Data with UNESCO or Reiniger-Ross Algorithm
oce.as.raw Version of as.raw() That Clips Data
oce.axis.POSIXct Oce Version of axis.POSIXct
oce.colors9A Create Colors Similar to the Matlab Jet Scheme
oce.colors9B Create Colors in a Red-Yellow-Blue Color Scheme
oce.colorsCDOM Create Colors Suitable for CDOM Fields
oce.colorsChlorophyll Create Colors Suitable for chlorophyll Fields
oce.colorsDensity Create Colors Suitable for density Fields
oce.colorsFreesurface Create Colors Suitable for freesurface Fields
oce.colorsGebco Create Colors in a GEBCO-like Scheme
oce.colorsJet Create Colors Similar to the Matlab Jet Scheme
oce.colorsOxygen Create Colors Suitable for oxygen Fields
oce.colorsPalette Create a Vector of Colors
oce.colorsPAR Create Colors Suitable for PAR Fields
oce.colorsPhase Create Colors Suitable for phase Fields
oce.colorsSalinity Create Colors Suitable for salinity Fields
oce.colorsTemperature Create Colors Suitable for temperature Fields
oce.colorsTurbidity Create Colors Suitable for turbidity Fields
oce.colorsTurbo Create Colors Similar to the Google Turbo Scheme
oce.colorsTwo Create Two-Color Palette
oce.colorsVelocity Create Colors Suitable for velocity Fields
oce.colorsViridis Create Colors Similar to the Matlab Viridis Scheme
oce.colorsVorticity Create Colors Suitable for vorticity Fields
oce.contour Oce Variant of contour
oce.convolve Convolve Two Time Series
oce.debug Print a Debugging Message
oce.edit Edit an Oce Object
oce.filter Filter a Time Series
oce.grid Add a Grid to an Existing Oce Plot
oce.plot.ts Oce Variant of plot.ts
oce.pmatch Partial Matching of Strings or Numbers
oce.smooth Smooth an oce Object
oce.spectrum Normalize a Spectrum
oce.write.table Write the Data Portion of Object to a File
oceApprox Interpolate 1D Data with UNESCO or Reiniger-Ross Algorithm
oceAxis Draw an Axis, Possibly with Decade-style Logarithmic Scaling
ocecolors Data That Define Some Color Palettes
oceColors9A Create Colors Similar to the Matlab Jet Scheme
oceColors9B Create Colors in a Red-Yellow-Blue Color Scheme
oceColorsCDOM Create Colors Suitable for CDOM Fields
oceColorsChlorophyll Create Colors Suitable for chlorophyll Fields
oceColorsClosure Create Color Functions
oceColorsDensity Create Colors Suitable for density Fields
oceColorsFreesurface Create Colors Suitable for freesurface Fields
oceColorsGebco Create Colors in a GEBCO-like Scheme
oceColorsJet Create Colors Similar to the Matlab Jet Scheme
oceColorsOxygen Create Colors Suitable for oxygen Fields
oceColorsPalette Create a Vector of Colors
oceColorsPAR Create Colors Suitable for PAR Fields
oceColorsPhase Create Colors Suitable for phase Fields
oceColorsSalinity Create Colors Suitable for salinity Fields
oceColorsTemperature Create Colors Suitable for temperature Fields
oceColorsTurbidity Create Colors Suitable for turbidity Fields
oceColorsTurbo Create Colors Similar to the Google Turbo Scheme
oceColorsTwo Create Two-Color Palette
oceColorsVelocity Create Colors Suitable for velocity Fields
oceColorsViridis Create Colors Similar to the Matlab Viridis Scheme
oceColorsVorticity Create Colors Suitable for vorticity Fields
oceContour Oce Variant of contour
oceConvolve Convolve Two Time Series
oceCRS Coordinate Reference System Strings for Some Oceans
oceDebug Print a Debugging Message
oceDeleteData Delete Something From the data Slot of an oce Object
oceDeleteMetadata Delete Something in an oce metadata Slot
oceEdit Edit an Oce Object
oceFileTrim Trim an oce File
oceFilter Filter a Time Series
oceGetData Extract Something From the data Slot of an oce Object
oceGetMetadata Extract Something From the metadata Slot of an oce Object
oceMagic Find the Type of an Oceanographic Data File
oceNames2whpNames Translate Oce Data Names to WHP Data Names
ocePmatch Partial Matching of Strings or Numbers
oceProject Wrapper to sf::sf_project()
oceRenameData Rename Something in the data slot of an oce Object
oceRenameMetadata Rename Something in the metadata Slot of an oce Object
oceSetData Set Something in the data Slot of an oce Object
oceSetMetadata Set Something in the metadata Slot of an oce Object
oceSmooth Smooth an oce Object
oceSpectrum Normalize a Spectrum
oceUnits2whpUnits Translate oce Unit to WHP Unit
odf-class Class to Store ODF Data
ODF2oce Create ODF Object From Output of read_ODF in ODF package
ODFListFromHeader Create a List of odf Header Metadata
ODFNames2oceNames Translate ODF CODE Strings to oce Variable Names

-- P --

parseLatLon Parse a Latitude or Longitude String
plot-method Plot an adp Object
plot-method Plot an adv Object
plot-method Plot an amsr Object
plot-method Plot an argo Object
plot-method Plot a bremen Object
plot-method Plot a cm Object
plot-method Plot a coastline Object
plot-method Plot a ctd Object
plot-method Plot an echosounder Object
plot-method Plot a gps Object
plot-method Plot an ladp Object
plot-method Plot a landsat Object
plot-method Plot a lisst Object
plot-method Plot a lobo object
plot-method Plot a met Object
plot-method Plot an oce Object
plot-method Plot an odf Object
plot-method Plot a rsk Object
plot-method Plot a satellite Object
plot-method Plot a sealevel Object
plot-method Plot a section Object
plot-method Plot a tidem Object
plot-method Plot a topo Object
plot-method Plot a windrose Object
plot-method Plot an xbt Object
plot.adp Plot an adp Object
plot.adv Plot an adv Object
plot.amsr Plot an amsr Object
plot.argo Plot an argo Object
plot.bremen Plot a bremen Object
plot.cm Plot a cm Object
plot.coastline Plot a coastline Object
plot.ctd Plot a ctd Object
plot.echosounder Plot an echosounder Object
plot.gps Plot a gps Object
plot.ladp Plot an ladp Object
plot.landsat Plot a landsat Object
plot.lisst Plot a lisst Object
plot.lobo Plot a lobo object
plot.met Plot a met Object
plot.oce Plot an oce Object
plot.odf Plot an odf Object
plot.rsk Plot a rsk Object
plot.satellite Plot a satellite Object
plot.sealevel Plot a sealevel Object
plot.section Plot a section Object
plot.tidem Plot a tidem Object
plot.topo Plot a topo Object
plot.windrose Plot a windrose Object
plot.xbt Plot an xbt Object
plotInset Plot an Inset Diagram
plotPolar Draw a Polar Plot
plotProfile Plot a ctd Profile
plotScan Plot a ctd Object in a Low-Level Fashion
plotSticks Draw a Stick Plot
plotTaylor Plot a Model-data Comparison Diagram
plotTS Plot Temperature-Salinity Diagram
predict.tidem Predict a Tidal Signal
preferAdjusted Set Preference for Adjusted Values
presentTime Get the Present Time, in a Stated Timezone
prettyPosition Pretty Longitude/Latitude in Degree-Minute-Second Format
processingLog<- Add an Item to a Processing Log
processingLogAppend Append an Item to a Processing Log
processingLogItem Create an Item That can be Inserted into a Processing Log
processingLogShow Show the Processing Log of an oce Object
pwelch Welch Periodogram

-- R --

rangeExtended Calculate Range, Extended a Little, as is Done for Axes
rangeLimit Substitute NA for Data Outside a Range
read.adp Read an adp File
read.adp.ad2cp Read an adp File in Nortek AD2CP Format
read.adp.nortek Read an adp File in Nortek Format
read.adp.rdi Read an adp File in Teledyne/RDI Format
read.adp.sontek Read an adp File in Sontek Format
read.adp.sontek.serial Read an adp File in Serial Sontek Format
read.adv Read an adv File
read.adv.nortek Read an adv File
read.adv.sontek.adr Read an adv File
read.adv.sontek.serial Read an adv File
read.adv.sontek.text Read an adv File
read.amsr Read an amsr File
read.aquadopp Read an adp File in Nortek Aquadopp Format
read.aquadoppHR Read Nortek Aquadopp-HR File
read.aquadoppProfiler Read an adp File in Nortek Aquadopp Format
read.argo Read an Argo Data File
read.argo.copernicus Read an argo File in Copernicus Format
read.bremen Read a bremen File
read.cm Read a cm File
read.coastline Read a coastline File
read.coastline.openstreetmap Read a coastline File in Openstreetmap Format
read.coastline.shapefile Read a coastline File in Shapefile Format
read.ctd Read a ctd File in General Format
read.ctd.aml Read a ctd File in AML Format
read.ctd.itp Read a ctd File in ITP Format
read.ctd.odf Read a ctd File in odf Format
read.ctd.odv Read a "ctd" File in ODV Format
read.ctd.saiv Read a ctd File in SAIV Format
read.ctd.sbe Read a ctd File in Seabird Format
read.ctd.ssda Read a ctd File in SSDA Format
read.ctd.woce Read a ctd File in WOCE-Exchange Format
read.ctd.woce.other Read a ctd File in WOCE-Exchange EXPOCODE Format
read.echosounder Read an echosounder File
read.g1sst Read a g1sst File
read.gps Read a gps File
read.index Read a NOAA Ocean Index File
read.landsat Read a landsat File Directory
read.lisst Read a lisst File
read.lobo Read a lobo File
read.met Read a met File
read.netcdf Read a NetCDF File
read.oce Read an Oceanographic Data File
read.odf Read an odf File
read.rsk Read a rsk File
read.sealevel Read a sealevel File
read.section Read a section File
read.topo Read a topo File
read.woa Read a World Ocean Atlas NetCDF File
read.xbt Read an xbt file
read.xbt.edf Read an xbt File in Sippican Format
read.xbt.noaa1 Read an xbt File in NOAA Format
rescale Rescale Values to lie in a Given Range
resizableLabel Variable Names in Adjustable Sizes
retime Adjust The Time Within an oce Object
rotateAboutZ Rotate Velocity Components Within an oce Object
rsk Sample rsk Data
rsk-class Class to Store Rsk Data
rsk2ctd Create a ctd Object from an rsk Object
rskPatm Estimate Atmospheric Pressure in an rsk Object
rskToc Decode Table-of-Contents From an rsk File
runlm Calculate Running Linear Models

-- S --

satellite-class Class to Store Satellite Data
sealevel Sample sealevel Data (Halifax Harbour)
sealevel-class Class to Store Sealevel Data
sealevelTuktoyaktuk Sample sealevel Data (Tuktoyaktuk)
secondsToCtime Express Time Interval as Colon-Separated String
section Sample section Data
section-class Class to Store Hydrographic Section Data
sectionAddCtd Add a ctd Profile to a section Object
sectionAddStation Add a ctd Profile to a section Object
sectionGrid Grid a Section in Pressure Space
sectionSmooth Smooth a Section
sectionSort Sort a Section
setFlags Set Data-Quality Flags within a oce Object
setFlags-method Set Data-Quality Flags within a adp Object
setFlags-method Set Data-Quality Flags within a ctd Object
setFlags-method Set Data-Quality Flags within a oce Object
shiftLongitude Shift Longitude to Range -180 to 180
showMetadataItem Show an Item in the metadata Slot of an oce Object
siderealTime Convert From POSIXt Time to Sidereal Time
snakeToCamel Convert From Snake-Case to Camel-Case Notation
standardDepths Standard Oceanographic Depths
standardizeLongitude Put Longitude in the Range From -180 to 180
subset-method Subset an adp Object
subset-method Subset an adv Object
subset-method Subset an amsr Object
subset-method Subset an argo Object
subset-method Subset a cm Object
subset-method Subset a coastline Object
subset-method Subset a ctd Object
subset-method Subset an echosounder Object
subset-method Subset a lobo Object
subset-method Subset a met Object
subset-method Subset an oce Object
subset-method Subset an odf Object
subset-method Subset a rsk Object
subset-method Subset a sealevel Object
subset-method Subset a section Object
subset-method Subset a topo Object
subset-method Subset an xbt Object
subset.argo Subset an argo Object
subset.coastline Subset a coastline Object
subset.section Subset a section Object
subtractBottomVelocity Subtract Bottom Velocity From an adp Object
summary-method Summarize an adp Object
summary-method Summarize an adv Object
summary-method Summarize an amsr Object
summary-method Summarize an argo Object
summary-method Summarize a bremen Object
summary-method Summarize a cm Object
summary-method Summarize a coastline Object
summary-method Summarize a ctd Object
summary-method Summarize an echosounder Object
summary-method Summarize a gps Object
summary-method Summarize an ladp Object
summary-method Summarize a landsat Object
summary-method Summarize a lisst Object
summary-method Summarize a lobo Object
summary-method Summarize a met Object
summary-method Summarize an oce Object
summary-method Summarize an odf Object
summary-method Summarize a rsk Object
summary-method Summarize a satellite Object
summary-method Summarize a sealevel Object
summary-method Summarize a section Object
summary-method Summarize a tidem Object
summary-method Summarize a topo Object
summary-method Summarize a windrose Object
summary-method Summarize an xbt Object
summary.adp Summarize an adp Object
summary.argo Summarize an argo Object
summary.coastline Summarize a coastline Object
summary.ctd Summarize a ctd Object
summary.section Summarize a section Object
sunAngle Solar Angle as Function of Space and Time
sunDeclinationRightAscension Sun Declination and Right Ascension
swAbsoluteSalinity Seawater Absolute Salinity (GSW Formulation)
swAlpha Seawater Thermal Expansion Coefficient
swAlphaOverBeta Ratio of Seawater Thermal Expansion Coefficient to Haline Contraction Coefficient
swBeta Seawater Haline Contraction Coefficient
swConservativeTemperature Seawater Conservative Temperature (GSW Formulation)
swCSTp Electrical Conductivity Ratio From Salinity, Temperature and Pressure
swDepth Water Depth
swDynamicHeight Dynamic Height of a Seawater Profile
swLapseRate Seawater Lapse Rate
swN2 Squared Buoyancy Frequency for Seawater
swPressure Water Pressure
swRho Seawater Density
swRrho Density Ratio
swSCTp Practical Salinity From Electrical Conductivity, Temperature and Pressure
swSigma Seawater Density Anomaly
swSigma0 Seawater Potential Density Anomaly Referenced to Surface Pressure
swSigma1 Seawater Potential Density Anomaly Referenced to 1000db Pressure
swSigma2 Seawater Potential Density Anomaly Referenced to 2000db Pressure
swSigma3 Seawater Potential Density Anomaly Referenced to 3000db Pressure
swSigma4 Seawater Potential Density Anomaly Referenced to 4000db Pressure
swSigmaT Seawater Quasi-Potential Density Anomaly
swSigmaTheta Seawater Potential Density Anomaly
swSoundAbsorption Seawater Sound Absorption
swSoundSpeed Seawater Sound Speed
swSpecificHeat Seawater Specific Heat
swSpice Seawater Spiciness
swSR Seawater Reference Salinity (GSW Formulation)
swSstar Seawater Preformed Salinity (GSW Formulation)
swSTrho Seawater Salinity From Temperature and Density
swTFreeze Seawater Freezing Temperature
swThermalConductivity Seawater Thermal Conductivity
swTheta Seawater Potential Temperature (UNESCO Version)
swTSrho Seawater Temperature from Salinity and Density
swViscosity Seawater Viscosity
swZ Vertical Coordinate

-- T --

T68fromT90 Convert From ITS-90 to IPTS-68 Temperature
T90fromT48 Convert From ITS-48 to ITS-90 Temperature
T90fromT68 Convert From IPTS-68 to ITS-90 Temperature
tail.oce Extract the End of an Oce Object
threenum Calculate Minimum, Mean, and Maximum Values
tidalCurrent Tidal Current Dataset
tidedata Tidal Constituent Information
tidem Fit a Tidal Model to a Timeseries
tidem-class Class to Store Tidal Models
tidemAstron Astronomical Calculations for tidem
tidemConstituentNameFix Change Tidal Constituent Name from T-TIDE to Foreman Convention
tidemVuf Nodal Modulation Calculations for Tidal Analyses
timeToArgoJuld Convert Time to Argo Julian Day (juld)
titleCase Capitalize First Letter of Each of a Vector of Words
toEnu Rotate Acoustic-Doppler Data to the ENU Coordinate System
toEnuAdp Convert an adp Object to ENU Coordinates
toEnuAdv Convert an adv Object to ENU Coordinates
topo-class Class to Store Topographic Data
topoInterpolate Interpolate Within a topo Object
topoWorld Global Topographic Data (at Half-degree Resolution)

-- U --

unabbreviateYear Determine Year From Various Abbreviations
undriftTime Correct for Drift in an Instrument Clock
unduplicateNames Rename Duplicated Character Strings
ungrid Extract (x, y, z) From (x, y, grid)
unitFromString Decode Units From Strings
unitFromStringRsk Infer rsk Units From a Vector of Strings
unwrapAngle Unwrap an Angle That Suffers Modulo-360 Problems
useHeading Replace the Heading for One Instrument With That of Another
usrLonLat Calculate Geographic Coordinates of Plot Box
utm2lonlat Convert UTM to Longitude and Latitude

-- V --

vectorShow Show Some Values From a List, Vector or Matrix
velocityStatistics Report Statistics of adp or adv Velocities

-- W --

webtide Get a Tidal Prediction From a WebTide Database
wind Sample Wind Data
window.oce Window an oce Object by Time or Distance
windrose-class Class to Store windrose Data
woceNames2oceNames Translate WOCE Data Names to Oce Data Names
woceUnit2oceUnit Translate WOCE Units to oce Units
write.ctd Save a ctd Object in a CSV File

-- X --

xbt Sample xbt Data
xbt-class Class to Store XBT (Expendable Bathythermograph) Data
xbt.edf Sample xbt File in .edf Format
xyzToEnu Convert Acoustic-Doppler Data From XYZ to ENU Coordinates
xyzToEnuAdp Convert adp Object From XYZ to ENU Coordinates
xyzToEnuAdpAD2CP Convert adp Object of AD2CP type From XYZ to ENU Coordinates
xyzToEnuAdv Convert an adv Object From XYZ to ENU Coordinates

-- misc --

[[-method Extract Something From an adp Object
[[-method Extract Something from an adv Object
[[-method Extract Something From an amsr Object
[[-method Extract Something From an argo Object
[[-method Extract Something From a bremen Object
[[-method Extract Something From a cm Object
[[-method Extract Something From a coastline Object
[[-method Extract Something From a ctd Object
[[-method Extract Something From an echosounder Object
[[-method Extract Something From a g1sst Object
[[-method Extract Something From a gps Object
[[-method Extract Something From an ladp Object
[[-method Extract Something From a landsat Object
[[-method Extract Something From a lisst Object
[[-method Extract Something From a lobo Object
[[-method Extract Something From a met Object
[[-method Extract Something From an oce Object
[[-method Extract Something From an odf Object
[[-method Extract Something From a rsk Object
[[-method Extract Something From a sealevel Object
[[-method Extract Something From a section Object
[[-method Extract Something From a tidem Object
[[-method Extract Something From a topo Object
[[-method Extract Something From a windrose Object
[[-method Extract Something From an xbt Object
[[<--method Replace Parts of an adp Object
[[<--method Replace Parts of an adv Object
[[<--method Replace Parts of an amsr Object
[[<--method Replace Parts of an argo Object
[[<--method Replace Parts of a bremen Object
[[<--method Replace Parts of a cm Object
[[<--method Replace Parts of a coastline Object
[[<--method Replace Parts of a ctd Object
[[<--method Replace Parts of an echosounder Object
[[<--method Replace Parts of a g1sst Object
[[<--method Replace Parts of a gps Object
[[<--method Replace Parts of an ladp Object
[[<--method Replace Parts of a landsat Object
[[<--method Replace Parts of a lisst Object
[[<--method Replace Parts of a lobo Object
[[<--method Replace Parts of a met Object
[[<--method Replace Parts of an oce Object
[[<--method Replace Parts of an odf Object
[[<--method Replace Parts of an rsk Object
[[<--method Replace Parts of a sealevel Object
[[<--method Replace Parts of a section Object
[[<--method Replace Parts of a tidem Object
[[<--method Replace Parts of a topo Object
[[<--method Replace Parts of a windrose Object
[[<--method Replace Parts of an xbt Object