Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R

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Documentation for package ‘wgaim’ version 2.0-1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

wgaim-package	Whole Genome Average Interval Mapping (wgaim) for QTL detection and estimation
cross2int	Convert a cross genetic object to an interval object
genoCxR	Genotypic marker data for Cascades x RAC875-2 doubled haploid population in R/qtl format
genoRxK	Genotypic marker data for RAC875 x Kukri doubled haploid population in R/qtl format
genoSxT	Genotypic marker data for Sunco x Tasman doubled haploid population in R/qtl format
linkMap	Plot a genetic linkage map
linkMap.cross	Plot a genetic linkage map
linkMap.default	Plot a genetic linkage map with QTL for multiple traits
linkMap.wgaim	Plot a genetic linkage map with QTL
outStat	A faceted ggplot of the chromosome outlier statistics or the interval blups/outlier statistics obtained from specified iteratons of wgaim.
phenoCxR	Phenotypic Cascades x RAC875-2 zinc experiment data frame
phenoRxK	Phenotypic RAC875 x Kukri trial data frame
phenoSxT	Phenotypic Sunco x Tasman trial data frame
print.summary.wgaim	Summary and print methods for the class '"wgaim"'
print.wgaim	Summary and print methods for the class '"wgaim"'
qtlTable	Stack QTL summary information into a super table
summary.wgaim	Summary and print methods for the class '"wgaim"'
tr	Display diagnostic information about the QTL detected.
tr.wgaim	Display diagnostic information about the QTL detected.
wgaim	wgaim method for class "asreml"
wgaim.asreml	wgaim method for class "asreml"