General Linear Mixed Models for Gene-Level Differential Expression


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Documentation for package ‘glmmSeq’ version 0.1.0

Help Pages

fcPlot Plotly or ggplot fold change plots
glmmGene Glmm for sequencing results of a single gene
glmmQvals Glmm Sequencing qvalues
glmmSeq Glmm for sequencing results
GlmmSeq-class An S4 class to define the glmmSeq output
maPlot MA plots
metadata Minimal metadata from PEAC
modelPlot Model plot
pairedPlot Paired plots
tpm TPM count data from PEAC