Probabilistic Supervised Learning for 'mlr3'


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Documentation for package ‘mlr3proba’ version 0.4.4

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A C D G L M P T W misc

mlr3proba-package mlr3proba: Probabilistic Supervised Learning for 'mlr3'

-- A --

actg ACTG 320 Clinical Trial Dataset
assert_surv Assert survival object
as_prediction_dens Convert to a Density Prediction
as_prediction_dens.data.frame Convert to a Density Prediction
as_prediction_dens.PredictionDens Convert to a Density Prediction
as_prediction_surv Convert to a Survival Prediction
as_prediction_surv.data.frame Convert to a Survival Prediction
as_prediction_surv.PredictionSurv Convert to a Survival Prediction
as_task_dens Convert to a Density Task
as_task_dens.data.frame Convert to a Density Task
as_task_dens.DataBackend Convert to a Density Task
as_task_dens.TaskDens Convert to a Density Task
as_task_surv Convert to a Survival Task
as_task_surv.data.frame Convert to a Survival Task
as_task_surv.DataBackend Convert to a Survival Task
as_task_surv.TaskSurv Convert to a Survival Task

-- C --

crankcompositor Estimate Survival crank Predict Type Pipeline

-- D --

distrcompositor Estimate Survival distr Predict Type Pipeline

-- G --

gbcs German Breast Cancer Study (GBCS) Dataset
grace GRACE 1000 Dataset

-- L --

LearnerDens Density Learner
LearnerDensHistogram Histogram Density Estimator
LearnerDensKDE Kernel Density Estimator
LearnerSurv Survival Learner
LearnerSurvCoxPH Cox Proportional Hazards Survival Learner
LearnerSurvKaplan Kaplan-Meier Estimator Survival Learner
LearnerSurvRpart Rpart Survival Trees Survival Learner

-- M --

MeasureDens Density Measure
MeasureDensLogloss Log loss Density Measure
MeasureSurv Survival Measure
MeasureSurvAUC Abstract Class for survAUC Measures
MeasureSurvBrier Integrated Graf Score Survival Measure
MeasureSurvCalibrationAlpha Van Houwelingen's Alpha Survival Measure
MeasureSurvCalibrationBeta Van Houwelingen's Beta Survival Measure
MeasureSurvChamblessAUC Chambless and Diao's AUC Survival Measure
MeasureSurvCindex Concordance Statistics Survival Measure
MeasureSurvDCalibration D-Calibration Survival Measure
MeasureSurvGraf Integrated Graf Score Survival Measure
MeasureSurvHungAUC Hung and Chiang's AUC Survival Measure
MeasureSurvIntLogloss Integrated Log loss Survival Measure
MeasureSurvLogloss Log loss Survival Measure
MeasureSurvMAE Mean Absolute Error Survival Measure
MeasureSurvMSE Mean Squared Error Survival Measure
MeasureSurvNagelkR2 Nagelkerke's R2 Survival Measure
MeasureSurvOQuigleyR2 O'Quigley, Xu, and Stare's R2 Survival Measure
MeasureSurvRMSE Root Mean Squared Error Survival Measure
MeasureSurvSchmid Integrated Schmid Score Survival Measure
MeasureSurvSongAUC Song and Zhou's AUC Survival Measure
MeasureSurvSongTNR Song and Zhou's TNR Survival Measure
MeasureSurvSongTPR Song and Zhou's TPR Survival Measure
MeasureSurvUnoAUC Uno's AUC Survival Measure
MeasureSurvUnoTNR Uno's TNR Survival Measure
MeasureSurvUnoTPR Uno's TPR Survival Measure
MeasureSurvXuR2 Xu and O'Quigley's R2 Survival Measure
mlr3proba mlr3proba: Probabilistic Supervised Learning for 'mlr3'
mlr_graphs_crankcompositor Estimate Survival crank Predict Type Pipeline
mlr_graphs_distrcompositor Estimate Survival distr Predict Type Pipeline
mlr_graphs_probregrcompositor Estimate Regression distr Predict Type Pipeline
mlr_graphs_survaverager Survival Prediction Averaging Pipeline
mlr_graphs_survbagging Survival Prediction Averaging Pipeline
mlr_graphs_survtoregr Survival to Regression Reduction Pipeline
mlr_learners_dens.hist Histogram Density Estimator
mlr_learners_dens.kde Kernel Density Estimator
mlr_learners_surv.coxph Cox Proportional Hazards Survival Learner
mlr_learners_surv.kaplan Kaplan-Meier Estimator Survival Learner
mlr_learners_surv.rpart Rpart Survival Trees Survival Learner
mlr_measures_dens.logloss Log loss Density Measure
mlr_measures_surv.brier Integrated Graf Score Survival Measure
mlr_measures_surv.calib_alpha Van Houwelingen's Alpha Survival Measure
mlr_measures_surv.calib_beta Van Houwelingen's Beta Survival Measure
mlr_measures_surv.chambless_auc Chambless and Diao's AUC Survival Measure
mlr_measures_surv.cindex Concordance Statistics Survival Measure
mlr_measures_surv.dcalib D-Calibration Survival Measure
mlr_measures_surv.graf Integrated Graf Score Survival Measure
mlr_measures_surv.hung_auc Hung and Chiang's AUC Survival Measure
mlr_measures_surv.intlogloss Integrated Log loss Survival Measure
mlr_measures_surv.logloss Log loss Survival Measure
mlr_measures_surv.mae Mean Absolute Error Survival Measure
mlr_measures_surv.mse Mean Squared Error Survival Measure
mlr_measures_surv.nagelk_r2 Nagelkerke's R2 Survival Measure
mlr_measures_surv.oquigley_r2 O'Quigley, Xu, and Stare's R2 Survival Measure
mlr_measures_surv.rmse Root Mean Squared Error Survival Measure
mlr_measures_surv.schmid Integrated Schmid Score Survival Measure
mlr_measures_surv.song_auc Song and Zhou's AUC Survival Measure
mlr_measures_surv.song_tnr Song and Zhou's TNR Survival Measure
mlr_measures_surv.song_tpr Song and Zhou's TPR Survival Measure
mlr_measures_surv.uno_auc Uno's AUC Survival Measure
mlr_measures_surv.uno_tnr Uno's TNR Survival Measure
mlr_measures_surv.uno_tpr Uno's TPR Survival Measure
mlr_measures_surv.xu_r2 Xu and O'Quigley's R2 Survival Measure
mlr_pipeops_compose_crank PipeOpCrankCompositor
mlr_pipeops_compose_distr PipeOpDistrCompositor
mlr_pipeops_compose_probregr PipeOpProbregrCompositor
mlr_pipeops_survavg PipeOpSurvAvg
mlr_pipeops_trafopred_regrsurv PipeOpPredRegrSurv
mlr_pipeops_trafopred_survregr PipeOpPredSurvRegr
mlr_pipeops_trafotask_regrsurv PipeOpTaskRegrSurv
mlr_pipeops_trafotask_survregr PipeOpTaskSurvRegr
mlr_tasks_actg ACTG 320 Survival Task
mlr_tasks_faithful Old Faithful Eruptions Density Task
mlr_tasks_gbcs German Breast Cancer Study Survival Task
mlr_tasks_grace GRACE 1000 Survival Task
mlr_tasks_lung Lung Cancer Survival Task
mlr_tasks_precip Annual Precipitation Density Task
mlr_tasks_rats Rats Survival Task
mlr_tasks_unemployment Unemployment Duration Survival Task
mlr_tasks_whas Worcester Heart Attack Study (WHAS) Survival Task
mlr_task_generators_simdens Density Task Generator for Package 'distr6'
mlr_task_generators_simsurv Survival Task Generator for Package 'simsurv'

-- P --

pecs Prediction Error Curves for PredictionSurv and LearnerSurv
pecs.list Prediction Error Curves for PredictionSurv and LearnerSurv
pecs.PredictionSurv Prediction Error Curves for PredictionSurv and LearnerSurv
pipeline_crankcompositor Estimate Survival crank Predict Type Pipeline
pipeline_distrcompositor Estimate Survival distr Predict Type Pipeline
pipeline_probregrcompositor Estimate Regression distr Predict Type Pipeline
pipeline_survaverager Survival Prediction Averaging Pipeline
pipeline_survbagging Survival Prediction Averaging Pipeline
pipeline_survtoregr Survival to Regression Reduction Pipeline
PipeOpCrankCompositor PipeOpCrankCompositor
PipeOpDistrCompositor PipeOpDistrCompositor
PipeOpPredRegrSurv PipeOpPredRegrSurv
PipeOpPredSurvRegr PipeOpPredSurvRegr
PipeOpPredTransformer PipeOpPredTransformer
PipeOpProbregrCompositor PipeOpProbregrCompositor
PipeOpSurvAvg PipeOpSurvAvg
PipeOpTaskRegrSurv PipeOpTaskRegrSurv
PipeOpTaskSurvRegr PipeOpTaskSurvRegr
PipeOpTaskTransformer PipeOpTaskTransformer
PipeOpTransformer PipeOpTransformer
plot.LearnerSurv Visualization of fitted 'LearnerSurv' objects
PredictionDens Prediction Object for Density
PredictionSurv Prediction Object for Survival

-- T --

TaskDens Density Task
TaskGeneratorSimdens Density Task Generator for Package 'distr6'
TaskGeneratorSimsurv Survival Task Generator for Package 'simsurv'
TaskSurv Survival Task

-- W --

whas Worcester Heart Attack Study (WHAS) Dataset

-- misc --

.surv_return Get Survival Predict Types