CRAN Package Check Results for Package biomod2

Last updated on 2024-03-02 00:53:20 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.2-4 52.83 495.01 547.84 NOTE
r-devel-linux-x86_64-debian-gcc 4.2-4 42.69 358.37 401.06 NOTE
r-devel-linux-x86_64-fedora-clang 4.2-4 696.88 NOTE
r-devel-linux-x86_64-fedora-gcc 4.2-4 687.90 NOTE
r-devel-windows-x86_64 4.2-4 42.00 325.00 367.00 NOTE
r-patched-linux-x86_64 4.2-4 54.61 467.12 521.73 OK
r-release-linux-x86_64 4.2-4 46.16 472.17 518.33 OK
r-release-macos-arm64 4.2-4 145.00 OK
r-release-macos-x86_64 4.2-4 492.00 OK
r-release-windows-x86_64 4.2-4 59.00 432.00 491.00 OK
r-oldrel-macos-arm64 4.2-4 148.00 OK
r-oldrel-windows-x86_64 4.2-4 62.00 410.00 472.00 OK

Check Details

Version: 4.2-4
Check: Rd files
Result: NOTE checkRd: (-1) BIOMOD.stored.data.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD.stored.data.Rd:26-27: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD.stored.data.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD.stored.data.Rd:29-30: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD.stored.data.Rd:31-32: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD.stored.data.Rd:33-34: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleForecasting.Rd:114-115: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleForecasting.Rd:116-118: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleForecasting.Rd:119-120: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleForecasting.Rd:121-123: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:167-168: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:169-170: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:171-172: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:173-174: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:175: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:190-202: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:203-206: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:207-214: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:215-220: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:221-222: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:229: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:231-234: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:236-243: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:245-259: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:261-276: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_EnsembleModeling.Rd:278-282: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Modeling.Rd:321: Lost braces 321 | \code{\link[rpart]{rpart}}, code{\link[nnet]{nnet}}, | ^ checkRd: (-1) BIOMOD_ModelingOptions.Rd:70-86: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:77-78: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:79-81: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:87-90: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:91-95: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:96-97: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:124-126: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:127-142: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:134: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:135-137: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:143-144: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:145-149: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:150-151: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:152-160: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:170-171: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:173: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:180-181: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:182-186: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:187-191: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:192-193: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:194-195: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:202-203: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:213-214: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:223-239: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:230-231: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:232-234: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:240-242: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:253-254: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:266-267: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:269-273: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:275-280: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:282-287: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:289-294: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:296-298: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:300-301: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:303-304: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:306-307: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:307-308: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:310-311: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:313-314: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:316-317: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:317-319: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:321-323: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:325-327: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:329-332: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:334-336: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:338-340: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:342-344: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:346-348: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_ModelingOptions.Rd:350-352: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Projection.Rd:110-111: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Projection.Rd:112-113: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Projection.Rd:114-117: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Projection.Rd:118-119: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_Projection.Rd:120-122: Lost braces in \itemize; meant \describe ? checkRd: (-1) BIOMOD_RangeSize.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:32-33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:35-36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:37-38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:39-40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:42-43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) BIOMOD_RangeSize.Rd:44-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) biomod2_ensemble_model.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_ensemble_model.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) biomod2_model.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_CVnnet.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_CVnnet.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_CVnnet.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_FindOptimStat.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_FindOptimStat.Rd:43-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_FindOptimStat.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_FindOptimStat.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_FindOptimStat.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_PlotEvalBoxplot.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotEvalBoxplot.Rd:51-53: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotEvalMean.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotEvalMean.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotEvalMean.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotEvalMean.Rd:61: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotResponseCurves.Rd:86: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PlotVarImpBoxplot.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) bm_PseudoAbsences.Rd:114: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_PseudoAbsences.Rd:115: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_PseudoAbsences.Rd:116: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_PseudoAbsences.Rd:117-118: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:116: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:117: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:118: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:119: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:120-121: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_RunModelsLoop.Rd:122-123: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_VariablesImportance.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_VariablesImportance.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) bm_VariablesImportance.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 4.2-4
Check: Rd \usage sections
Result: NOTE Documented arguments not in \usage in Rd file 'predict2.em.Rd': ‘na.rm’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64