CRAN Package Check Results for Package greta.gp

Last updated on 2024-02-25 08:53:03 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 8.09 101.51 109.60 OK
r-devel-linux-x86_64-debian-gcc 0.2.1 8.19 78.14 86.33 OK
r-devel-linux-x86_64-fedora-clang 0.2.1 147.94 OK
r-devel-linux-x86_64-fedora-gcc 0.2.1 156.01 OK
r-devel-windows-x86_64 0.2.1 49.00 436.00 485.00 ERROR
r-patched-linux-x86_64 0.2.1 8.83 101.39 110.22 OK
r-release-linux-x86_64 0.2.1 11.32 101.35 112.67 OK
r-release-macos-arm64 0.2.1 63.00 OK
r-release-macos-x86_64 0.2.1 103.00 OK
r-release-windows-x86_64 0.2.1 18.00 181.00 199.00 OK
r-oldrel-macos-arm64 0.2.1 53.00 OK
r-oldrel-windows-x86_64 0.2.1 19.00 174.00 193.00 OK

Check Details

Version: 0.2.1
Check: tests
Result: ERROR Running 'testthat.R' [79s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(tensorflow) > library(greta.gp) Loading required package: greta Attaching package: 'greta' The following objects are masked from 'package:stats': binomial, cov2cor, poisson The following objects are masked from 'package:base': %*%, apply, backsolve, beta, chol2inv, colMeans, colSums, diag, eigen, forwardsolve, gamma, identity, rowMeans, rowSums, sweep, tapply > > test_check("greta.gp") i Initialising python and checking dependencies, this may take a moment. v Initialising python and checking dependencies ... done! running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores running 4 chains simultaneously on up to 2 cores [ FAIL 8 | WARN 0 | SKIP 5 | PASS 52 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test_gps.R:136:3', 'test_kernels.R:289:3', 'test_kernels.R:300:3', 'test_kernels.R:312:3', 'test_kernels.R:330:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_gps.R:69:3'): gaussian processes can be defined in models and sampled from ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:69:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:76:3'): gaussian processes can be defined in models and sampled from ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:76:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:88:3'): gaussian processes can be projected to new data ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:88:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:96:3'): gaussian processes can be projected to new data ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:96:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:102:3'): gaussian processes can be projected to new data ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:102:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:115:3'): gaussian processes can be projected with a different kernel ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:115:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:123:3'): gaussian processes can be projected with a different kernel ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:123:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) ── Failure ('test_gps.R:129:3'): gaussian processes can be projected with a different kernel ── `expr` threw an unexpected error. Message: argument "..2" is missing, with no default Class: simpleError/error/condition Backtrace: ▆ 1. ├─greta.gp:::expect_ok(mcmc(m, warmup = 2, n_samples = 2)) at test_gps.R:129:3 2. │ └─testthat::expect_error(expr, NA) at D:\RCompile\CRANpkg\local\4.4\greta.gp.Rcheck\tests\testthat\helpers.R:10:3 3. │ └─testthat:::expect_condition_matching(...) 4. │ └─testthat:::quasi_capture(...) 5. │ ├─testthat (local) .capture(...) 6. │ │ └─base::withCallingHandlers(...) 7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 8. └─greta::mcmc(m, warmup = 2, n_samples = 2) 9. └─greta:::run_samplers(...) 10. ├─greta (local) dispatch(...) 11. └─sampler$run_chain(...) 12. └─greta:::create_progress_bar(...) 13. └─glue::glue(...) 14. └─glue::glue_data(...) 15. └─base::lapply(...) 16. └─glue (local) FUN(X[[i]], ...) 17. ├─eval(call("force", as.symbol(paste0("..", x)))) %||% .null 18. ├─base::eval(call("force", as.symbol(paste0("..", x)))) 19. │ └─base::eval(call("force", as.symbol(paste0("..", x)))) 20. └─base::force(..2) [ FAIL 8 | WARN 0 | SKIP 5 | PASS 52 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'getting-started.Rmd' using rmarkdown Quitting from lines 59-62 [fit] (getting-started.Rmd) Error: processing vignette 'getting-started.Rmd' failed with diagnostics: argument "..2" is missing, with no default --- failed re-building 'getting-started.Rmd' SUMMARY: processing the following file failed: 'getting-started.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64