CodelistGenerator: Identify Relevant Clinical Codes and Evaluate Their Use

Generate a candidate code list for the Observational Medical Outcomes Partnership (OMOP) common data model based on string matching. For a given search strategy, a candidate code list will be returned.

Version: 2.2.3
Depends: R (≥ 3.5.0)
Imports: CDMConnector (≥ 1.3.0), checkmate (≥ 2.0.0), DBI (≥ 1.1.0), duckdb, dplyr (≥ 1.1.0), magrittr (≥ 2.0.0), omopgenerics (≥ 0.0.2), rlang (≥ 1.0.0), glue (≥ 1.5.0), stringr (≥ 1.4.0), tidyselect (≥ 1.2.0), tidyr (≥ 1.2.0), cli (≥ 3.1.0), purrr, lubridate, PatientProfiles (≥ 0.3.0), RJSONIO, vctrs
Suggests: covr, knitr, rmarkdown, testthat (≥ 3.0.0), RPostgres, odbc, spelling, tibble
Published: 2024-03-08
Author: Edward Burn ORCID iD [aut, cre], Marti Catala ORCID iD [ctb]
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://darwin-eu.github.io/CodelistGenerator/
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: CodelistGenerator results

Documentation:

Reference manual: CodelistGenerator.pdf
Vignettes: 01_Introduction_to_CodelistGenerator
a02_Candidate_codes_OA
03_Options_for_CodelistGenerator
a04_codelists_for_medications

Downloads:

Package source: CodelistGenerator_2.2.3.tar.gz
Windows binaries: r-devel: CodelistGenerator_2.2.3.zip, r-release: CodelistGenerator_2.2.3.zip, r-oldrel: CodelistGenerator_2.2.3.zip
macOS binaries: r-release (arm64): CodelistGenerator_2.2.3.tgz, r-oldrel (arm64): CodelistGenerator_2.2.3.tgz, r-release (x86_64): CodelistGenerator_2.2.3.tgz
Old sources: CodelistGenerator archive

Reverse dependencies:

Reverse suggests: CohortSurvival, DrugUtilisation, PatientProfiles

Linking:

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