IncidencePrevalence: Estimate Incidence and Prevalence using the OMOP Common Data Model

Calculate incidence and prevalence using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Incidence and prevalence can be estimated for the total population in a database or for a stratification cohort.

Version: 0.5.3
Depends: R (≥ 4.0)
Imports: CDMConnector (≥ 1.0.0), checkmate (≥ 2.0.0), cli (≥ 3.0.0), DBI (≥ 1.0.0), dbplyr (≥ 2.0.0), dplyr (≥ 1.1.0), glue (≥ 1.5.0), ggplot2 (≥ 3.4.0), scales (≥ 1.1.0), lubridate (≥ 1.0.0), magrittr (≥ 2.0.0), purrr (≥ 0.3.5), rlang (≥ 1.0.0), stringr (≥ 1.5.0), tidyr (≥ 1.2.0), tidyselect (≥ 1.2.0), zip (≥ 2.2.0)
Suggests: knitr, rmarkdown, RPostgres, tibble, duckdb, odbc, here, Hmisc, epitools, tictoc, testthat (≥ 0.3.1), spelling, PaRe
Published: 2023-11-23
Author: Edward Burn ORCID iD [aut, cre], Berta Raventos ORCID iD [aut], Marti Catala ORCID iD [aut], Mike Du ORCID iD [ctb], Yuchen Guo ORCID iD [ctb], Adam Black ORCID iD [ctb], Ger Inberg ORCID iD [ctb], Kim Lopez ORCID iD [ctb]
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://darwin-eu.github.io/IncidencePrevalence/
NeedsCompilation: no
Language: en-US
Materials: README
CRAN checks: IncidencePrevalence results

Documentation:

Reference manual: IncidencePrevalence.pdf
Vignettes: a01_Introduction_to_IncidencePrevalence
a02_Creating_denominator_cohorts
a03_Creating_outcome_cohorts
a05_Calculating_prevalence
a06_Calculating_incidence

Downloads:

Package source: IncidencePrevalence_0.5.3.tar.gz
Windows binaries: r-devel: IncidencePrevalence_0.5.3.zip, r-release: IncidencePrevalence_0.5.3.zip, r-oldrel: IncidencePrevalence_0.5.3.zip
macOS binaries: r-release (arm64): IncidencePrevalence_0.5.3.tgz, r-oldrel (arm64): IncidencePrevalence_0.5.3.tgz, r-release (x86_64): IncidencePrevalence_0.5.3.tgz, r-oldrel (x86_64): IncidencePrevalence_0.5.1.tgz
Old sources: IncidencePrevalence archive

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