Vicus: Exploiting Local Structures to Improve Network-Based Analysis of Biological Data

Compared with the similar graph embedding method such as Laplacian Eigenmaps, 'Vicus' can exploit more local structures of graph data. For the details of the methods, see the reference section of 'GitHub' README.md <https://github.com/rikenbit/Vicus>.

Version: 0.99.0
Depends: R (≥ 3.4.0)
Imports: methods, utils, RANN, Matrix, RSpectra
Suggests: scatterplot3d, knitr, rmarkdown, testthat
Published: 2023-03-23
Author: Koki Tsuyuzaki [aut, cre]
Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>
License: MIT + file LICENSE
URL: https://github.com/rikenbit/Vicus
NeedsCompilation: no
Materials: NEWS
CRAN checks: Vicus results

Documentation:

Reference manual: Vicus.pdf
Vignettes: Vicus: Exploiting local structures to improve network-based analysis of biological data

Downloads:

Package source: Vicus_0.99.0.tar.gz
Windows binaries: r-devel: Vicus_0.99.0.zip, r-release: Vicus_0.99.0.zip, r-oldrel: Vicus_0.99.0.zip
macOS binaries: r-release (arm64): Vicus_0.99.0.tgz, r-oldrel (arm64): Vicus_0.99.0.tgz, r-release (x86_64): Vicus_0.99.0.tgz

Linking:

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