gsdensity: Density-Based Gene Set Specificity Evaluation

Analysis frameworks for pathway heterogeneity and pathway activity evaluation in single-cell data, including scRNA-seq data and spatial genomics data.

Version: 0.1.2
Depends: R (≥ 4.0)
Imports: Seurat, CelliD, dnet, supraHex, Rgraphviz, infotheo, anticlust, multimode, philentropy, RANN, future.apply, MASS, reshape2, dplyr, igraph, Matrix, stats
Published: 2023-03-16
Author: Qingnan, Liang [aut, cre, cph], Ken Chen [aut, cph]
Maintainer: "Qingnan, Liang" <qliang3 at>
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: gsdensity results


Reference manual: gsdensity.pdf


Package source: gsdensity_0.1.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): gsdensity_0.1.2.tgz, r-oldrel (arm64): not available, r-release (x86_64): gsdensity_0.1.2.tgz, r-oldrel (x86_64): not available


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