plotHMM: Plot Hidden Markov Models

Hidden Markov Models are useful for modeling sequential data. This package provides several functions implemented in C++ for explaining the algorithms used for Hidden Markov Models (forward, backward, decoding, learning).

Version: 2023.8.28
Imports: Rcpp (≥ 1.0.7)
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, knitr, markdown, R.utils, covr, depmixS4, data.table, ggplot2, neuroblastoma, microbenchmark
Published: 2023-09-05
DOI: 10.32614/CRAN.package.plotHMM
Author: Toby Hocking [aut, cre]
Maintainer: Toby Hocking <toby.hocking at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: NEWS
CRAN checks: plotHMM results


Reference manual: plotHMM.pdf
Vignettes: Comparison with depmixS4
Multiple sequences


Package source: plotHMM_2023.8.28.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): plotHMM_2023.8.28.tgz, r-oldrel (arm64): plotHMM_2023.8.28.tgz, r-release (x86_64): plotHMM_2023.8.28.tgz, r-oldrel (x86_64): plotHMM_2023.8.28.tgz
Old sources: plotHMM archive


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