CRAN Package Check Results for Package PBD

Last updated on 2024-06-23 00:56:43 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4 5.85 97.51 103.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.4 3.17 66.44 69.61 NOTE
r-devel-linux-x86_64-fedora-clang 1.4 125.89 NOTE
r-devel-linux-x86_64-fedora-gcc 1.4 128.63 NOTE
r-devel-windows-x86_64 1.4 6.00 85.00 91.00 NOTE
r-patched-linux-x86_64 1.4 5.51 89.69 95.20 NOTE
r-release-linux-x86_64 1.4 4.25 92.05 96.30 NOTE
r-release-macos-arm64 1.4 39.00 NOTE
r-release-macos-x86_64 1.4 59.00 NOTE
r-release-windows-x86_64 1.4 6.00 85.00 91.00 NOTE
r-oldrel-macos-arm64 1.4 45.00 OK
r-oldrel-macos-x86_64 1.4 60.00 OK
r-oldrel-windows-x86_64 1.4 7.00 100.00 107.00 OK

Check Details

Version: 1.4
Check: Rd files
Result: NOTE checkRd: (-1) pbd_loglik.Rd:31: Lost braces 31 | \code{pars2[1]} {set the conditioning on non-extinction of the clade (1) or not (0) \cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:32: Lost braces 32 | \code{pars2[2]} {sets whether the likelihood is for the branching times (0) or the phylogeny (1) \cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:33: Lost braces 33 | \code{pars2[3]} {sets whether the first element of the branching times is the stem (1) or the crown (2) age \cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:34: Lost braces 34 | \code{pars2[4]} {sets whether the parameters and likelihood should be shown on screen (1) or not (0) \cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:35: Lost braces 35 | \code{pars2[5]} {sets which method should be used in the ode-solver. Default is 'lsoda'. See package deSolve for details. \cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:36: Lost braces 36 | \code{pars2[6]}{Sets the lower bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr} | ^ checkRd: (-1) pbd_loglik.Rd:37: Lost braces 37 | \code{pars2[7]}{Sets the upper bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.4
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘ade4’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc