Plant Photobiology Related Functions and Data
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Documentation for package ‘photobiologyPlants’ version 0.5.0
Help Pages
| photobiologyPlants-package | photobiologyPlants: Plant Photobiology Related Functions and Data |
| Betula_ermanii.mspct | Spectral data for 'Betula ermanii' leaves |
| B_G | Calculate B:G photon ratio from spectral irradiance. |
| carotenoids.mspct | Absorbance spectra for carotenoids. |
| chlorophylls.mspct | Absorbance spectra for chlorophylls. |
| chlorophylls_fluorescence.mspct | Fluorescence emission spectra for chlorophylls. |
| CRYs.mspct | CRY1, CRY2 and CRY3 absorbance spectra. |
| McCree_photosynthesis.mspct | McCree's action spectra for whole-leaf photosynthesis. |
| Pfr_Ptot | Calculate phytochrome photoequilibrium |
| Pfr_Ptot.default | Calculate phytochrome photoequilibrium |
| Pfr_Ptot.numeric | Calculate phytochrome photoequilibrium |
| Pfr_Ptot.source_spct | Calculate phytochrome photoequilibrium |
| Pfr_Ptot_R_FR | Pr:Ptot ratio (photoequilibrium) from R:FR photon ratio. |
| photobiologyPlants | photobiologyPlants: Plant Photobiology Related Functions and Data |
| PHOTs.mspct | PHOT1 and PHOT2 absorbance spectra. |
| PHYs.mspct | Tabulated data for Phytochrome Sigma |
| phytochrome.spct | Tabulated data for Phytochrome Sigma |
| Phy_reaction_rates | Phytochrome reaction rates |
| Phy_Sigma | Phytochrome Sigma as a function of wavelength |
| Phy_Sigma_FR | Pfr Sigma as a function of wavelength |
| Phy_Sigma_R | Pr Sigma as a function of wavelength |
| R_FR | Calculate R:FR photon ratio from spectral irradiance. |
| Solidago_altissima.mspct | Spectral optical data for 'Solidago altissima' leaves |
| UVA1_UV | Calculate UVA1:UV photon ratio from spectral irradiance. |
| UVA2_UV | Calculate UVA2:UV photon ratio from spectral irradiance. |
| UVAlw_UV | Calculate UVAlw:UV photon ratio from spectral irradiance. |
| UVAsw_UV | Calculate UVAsw:UV photon ratio from spectral irradiance. |
| UVA_PAR | Calculate UVA:PAR photon ratio from spectral irradiance. |
| UVA_UV | Calculate UVA:UV photon ratio from spectral irradiance. |
| UVB_PAR | Calculate UVB:PAR photon ratio from spectral irradiance. |
| UVB_UV | Calculate UVB:UV photon ratio from spectral irradiance. |
| UVB_UVA | Calculate UVB:UVA photon ratio from spectral irradiance. |
| UVR8s.mspct | UVR8 absorbance spectrum |
| UV_PAR | Calculate UV:PAR photon ratio from spectral irradiance. |
| ZTLs.mspct | ZTL absorbance spectra. |