Drawing SVG Graphics to Visualize and Map Genome-Wide Data on
Idiograms
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Documentation for package ‘RIdeogram’ version 0.2.2
Help Pages
| convertSVG | convertSVG |
| Fst_between_CE_and_CW | Fst between two Liriodendron groups |
| gene_density | Gene distribution across the human genome |
| GFFex | GFFex |
| human_karyotype | Karyotype information of the human genome |
| ideogram | ideogram |
| karyotype_dual_comparison | Karyotype for two genome comparison |
| karyotype_ternary_comparison | Karyotype for three genome comparison |
| liriodendron_karyotype | Karyotype information of the Liriodendron genome |
| LTR_density | LTR distribution across the human genome |
| Pi_for_CE | Pi of one Liriodendron group |
| Pi_for_CE_and_CW | Pi of two Liriodendron groups |
| Random_RNAs_500 | 500 RNAs' position |
| svg2jpg | convertSVG |
| svg2pdf | convertSVG |
| svg2png | convertSVG |
| svg2tiff | convertSVG |
| synteny_dual_comparison | Synteny for two genome comparison |
| synteny_ternary_comparison | Synteny for three genome comparison |
| synteny_ternary_comparison_graident | Synteny for three genome comparison with gradient fill |