Simulate and Model Family Pedigrees with Structured Founders


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Documentation for package ‘simfam’ version 1.0.3

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admix_fam Calculate admixture matrix of a pedigree with known admixture of founders
admix_last_gen Calculate admixture matrix for last generation of a pedigree with admixture of founders
draw_sex Draw sex values randomly for a list of individuals
geno_fam Draw random genotypes on a pedigree with known founder genotypes
geno_last_gen Draw random genotypes for last generation of a pedigree with known founder genotypes
kinship_fam Calculate kinship matrix of a pedigree with structured founders
kinship_last_gen Calculate kinship matrix for last generation of a pedigree with structured founders
prune_fam Remove non-ancestors of a set of individuals from pedigree
sim_pedigree Construct a random pedigree