* using log directory 'd:/Rcompile/CRANpkg/local/4.4/Thresher.Rcheck' * using R Under development (unstable) (2024-03-24 r86185 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'Thresher/DESCRIPTION' ... OK * this is package 'Thresher' version '1.1.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'Thresher' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) 01-dataObjects.Rd:18-19: Lost braces 18 | \item \code{sigma}{: A list of length five; each entry is a covariance matrix | ^ checkRd: (-1) 01-dataObjects.Rd:20-23: Lost braces 20 | \item \code{savedSims}{: A list of length five; each entry is a | ^ checkRd: (-1) 01-dataObjects.Rd:24-26: Lost braces 24 | \item \code{savedReap}{: A list of length five; each entry is a | ^ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [2s] OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [3s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [9s] OK Running '01-label.R' [2s] Comparing '01-label.Rout' to '01-label.Rout.save' ... OK Running '01-remap.R' [2s] Comparing '01-remap.Rout' to '01-remap.Rout.save' ... OK Running '02-thresh.R' [2s] Comparing '02-thresh.Rout' to '02-thresh.Rout.save' ... OK Running '04-reap.R' [3s] Comparing '04-reap.Rout' to '04-reap.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [21s] OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 1 NOTE