RUNIT TEST PROTOCOL--Wed Nov 20 13:54:45 2013

Number of test functions: 12

Number of errors: 2

Number of failures: 1

1 Test suite

Errors

Failures

Details

Test Suite: Jaatha Unit Testing

• Test file: it.custom_simulator.R
  • test.confInts: ERROR !! Error in FUN(X[[1L]], ...) : trying to get slot "likelihood.table" from an object (class "try-error") that is not an S4 object
    
• Test file: it.jaatha.R
  • test.dm.simSumStats: FAILURE !! (check number 4) Error in checkException(dm.simSumStats(dm.tt, c(2, 50))) : Error not generated as expected
    
  • test.initialSearch.folded: (1 checks) ... OK (8.39 seconds)
    
  • test.initialSearch.normal: (3 checks) ... OK (30.33 seconds)
    
  • test.initialSearch.seqgen: ERROR !! Error in 4:(m - 3) : argument of length 0
    
• Test file: it.sim-prog-seqgen.R
  • test.callSeqgen: (2 checks) ... OK (0.14 seconds)
    
  • test.F81Model: (1 checks) ... OK (0.21 seconds)
    
  • test.generateSeqgenOptions: (9 checks) ... OK (0 seconds)
    
  • test.GtrModel: (1 checks) ... OK (0.22 seconds)
    
  • test.HkyModel: (1 checks) ... OK (0.22 seconds)
    
  • test.RateHeterogenity: (3 checks) ... OK (0.25 seconds)
    
  • test.seqgenSingleSimFunc: (3 checks) ... OK (0.48 seconds)