CRAN Package Check Results for Package PLNmodels

Last updated on 2021-10-19 20:51:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.11.4 100.49 322.95 423.44 OK
r-devel-linux-x86_64-debian-gcc 0.11.4 86.04 225.33 311.37 OK
r-devel-linux-x86_64-fedora-clang 0.11.4 610.55 NOTE
r-devel-linux-x86_64-fedora-gcc 0.11.4 584.46 OK
r-devel-windows-x86_64 0.11.4 142.00 509.00 651.00 OK
r-devel-windows-x86_64-gcc10-UCRT 0.11.4 NOTE
r-patched-linux-x86_64 0.11.4 101.90 331.11 433.01 OK
r-patched-solaris-x86 0.11.4 616.60 ERROR
r-release-linux-x86_64 0.11.4 93.18 322.56 415.74 OK
r-release-macos-arm64 0.11.4 NOTE
r-release-macos-x86_64 0.11.4 NOTE
r-release-windows-ix86+x86_64 0.11.4 226.00 809.00 1035.00 NOTE
r-oldrel-macos-x86_64 0.11.4 NOTE
r-oldrel-windows-ix86+x86_64 0.11.4 259.00 795.00 1054.00 NOTE

Check Details

Version: 0.11.4
Check: installed package size
Result: NOTE
     installed size is 10.5Mb
     sub-directories of 1Mb or more:
     doc 2.1Mb
     libs 7.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.11.4
Check: Rd cross-references
Result: NOTE
    Undeclared package ‘DESeq2’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.11.4
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: 'DESeq2'
Flavor: r-devel-windows-x86_64-gcc10-UCRT

Version: 0.11.4
Check: examples
Result: ERROR
    Running examples in ‘PLNmodels-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: plot.PLNmixturefit
    > ### Title: Mixture visualization of a 'PLNmixturefit' object
    > ### Aliases: plot.PLNmixturefit
    >
    > ### ** Examples
    >
    > data(trichoptera)
    > trichoptera <- prepare_data(trichoptera$Abundance, trichoptera$Covariate)
    > myPLN <- PLNmixture(Abundance ~ 1 + offset(log(Offset)),
    + data = trichoptera, control_main = list(iterates = 0)) %>% getBestModel()
    
     Initialization...
    
     Adjusting 5 PLN mixture models.
     number of cluster = 1
     number of cluster = 2
     number of cluster = 3
     number of cluster = 4
     number of cluster = 5
    
     Smoothing PLN mixture models.
    
     Post-treatments
     DONE!
    > plot(myPLN, "pca")
    > plot(myPLN, "matrix")
    Warning: Transformation introduced infinite values in discrete y-axis
    Error in seq.default(min, max, by = by) : 'from' must be a finite number
    Calls: plot ... <Anonymous> -> f -> <Anonymous> -> seq -> seq.default
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.11.4
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'biomformat', 'phyloseq', 'Wrench'
Flavor: r-release-macos-arm64

Version: 0.11.4
Check: Rd cross-references
Result: NOTE
    Packages unavailable to check Rd xrefs: ‘DESeq2’, ‘Wrench’
Flavor: r-release-macos-arm64