Last updated on 2023-12-10 08:48:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 328.29 | 265.55 | 593.84 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 300.70 | 233.51 | 534.21 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 784.62 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 959.41 | NOTE | |||
| r-devel-windows-x86_64 | 1.0.0 | 266.00 | 253.00 | 519.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0.0 | 253.49 | 301.93 | 555.42 | NOTE | |
| r-release-linux-x86_64 | 1.0.0 | 241.07 | 307.36 | 548.43 | NOTE | |
| r-release-macos-arm64 | 1.0.0 | 208.00 | NOTE | |||
| r-release-macos-x86_64 | 1.0.0 | 279.00 | ERROR | |||
| r-release-windows-x86_64 | 1.0.0 | 334.00 | 310.00 | 644.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.0.0 | 191.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.0.0 | 308.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.0 | 324.00 | 306.00 | 630.00 | NOTE |
Version: 1.0.0
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.0
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.0.0
Check: installed package size
Result: NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
doc 1.5Mb
libs 3.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘spsurv-Ex.R’ failed
The error most likely occurred in:
> ### Name: bppo
> ### Title: Bernstein Polynomial Based Proportional Odds Model
> ### Aliases: bppo
>
> ### ** Examples
>
>
> library("spsurv")
> data("veteran")
Warning in data("veteran") : data set ‘veteran’ not found
>
> fit <- bppo(Surv(time, status) ~ karno + celltype,
+ data = veteran)
Error in optimHess(theta, fn, gr, control = list(fnscale = -1)) :
non-finite value supplied by optim
Calls: bppo ... spbp.mle -> <Anonymous> -> <Anonymous> -> .local -> optimHess
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [17s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
── Error ('test.R:33:1'): (code run outside of `test_that()`) ──────────────────
Error in `optimHess(theta, fn, gr, control = list(fnscale = -1))`: non-finite value supplied by optim
Backtrace:
▆
1. └─spsurv::bppo(Surv(time, status) ~ karno + factor(celltype), data = veteran) at test.R:33:0
2. └─spsurv:::spbp.default(...)
3. └─spsurv:::spbp.mle(standata = standata, ...)
4. ├─rstan::optimizing(...)
5. └─rstan::optimizing(...)
6. └─rstan (local) .local(object, ...)
7. └─stats::optimHess(theta, fn, gr, control = list(fnscale = -1))
[ FAIL 1 | WARN 7 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64