Visualising publication activity per gene based on a gene list and a user-defined set of keywords utilising R 'rentrez' <https://cran.r-project.org/package=rentrez/> that provides 'NCBI' <https://www.ncbi.nlm.nih.gov> database search like in 'PubMed' <https://pubmed.ncbi.nlm.nih.gov>. It summarises the retrieved number of publications for each gene in an overview bar plot (saved as 'png' file) and by choice a summary table (as 'csv') that including the most recent 100 'PubMed' IDs and publication titles.
| Version: |
1.1.0 |
| Depends: |
R (≥ 2.10) |
| Imports: |
rentrez (≥ 1.2.3), biomaRt (≥ 2.54.0), biomartr (≥ 1.0.2), grDevices (≥ 4.2.2), graphics (≥ 4.2.2), utils (≥ 4.2.2) |
| Suggests: |
knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: |
2023-03-14 |
| Author: |
Marina Leer  [aut,
cre, cph],
George Soultoukis
[ctb],
Masoome Oveisi [ctb],
German Research Foundation [fnd],
German Ministry of Education and Research [fnd],
State of Brandenburg [fnd] |
| Maintainer: |
Marina Leer <marina.leer at dife.de> |
| License: |
GPL (≥ 3) |
| NeedsCompilation: |
no |
| CRAN checks: |
GeSciLiVis results |