PEACH: Pareto Enrichment Analysis for Combining Heterogeneous Datasets

A meta gene set analysis tool developed based on principles of Pareto dominance (William B T Mock (2011) <doi:10.1007/978-1-4020-9160-5_341>). It is designed to combine gene set analysis p-values from multiple transcriptome datasets (e.g., microarray and RNA-Seq). The novel Pareto method for p-value combination allows PEACH to properly model heterogeneity and correlation in Omics datasets.

Version: 0.1.1
Depends: R (≥ 3.5.0), MASS (≥ 7.3-50), mnormt (≥ 1.5-6), metap (≥ 1.3)
Published: 2021-01-07
Author: Jinyan Chan [aut, cre], Jinghua Gu [aut, cre]
Maintainer: Jinyan Chan <Jinyan_Chan at baylor.edu>
License: GPL-2
NeedsCompilation: no
CRAN checks: PEACH results

Documentation:

Reference manual: PEACH.pdf

Downloads:

Package source: PEACH_0.1.1.tar.gz
Windows binaries: r-devel: PEACH_0.1.1.zip, r-release: PEACH_0.1.1.zip, r-oldrel: PEACH_0.1.1.zip
macOS binaries: r-release (arm64): PEACH_0.1.1.tgz, r-release (x86_64): PEACH_0.1.1.tgz, r-oldrel: PEACH_0.1.1.tgz

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