R Script Visualization in Cytoscape

This function allows the user to represent the content of a given script in ‘Cytoscape’ ( Therefore it is required to have a functioning version of ‘Cytoscape’ 3.6.1 or greater.

Color coding


A color code is associated to each nodes:


Edge color reports the sequence of command on a blue scale

Node color code extend to edges in case of loops or tests

Edges of type sinewave represent the connection between a node and itself when used as an indice.

Edges of type dots represent the commands within a if, else, else if, ifelse or loop condition.