allofus: Interface for 'All of Us' Researcher Workbench

Streamline use of the 'All of Us' Researcher Workbench (<https://www.researchallofus.org/data-tools/workbench/>)with tools to extract and manipulate data from the 'All of Us' database. Increase interoperability with the Observational Health Data Science and Informatics ('OHDSI') tool stack by decreasing reliance of 'All of Us' tools and allowing for cohort creation via 'Atlas'. Improve reproducible and transparent research using 'All of Us'.

Version: 1.1.0
Depends: R (≥ 2.10)
Imports: cli, tidyr, magrittr, dplyr (≥ 1.1.4), glue, bigrquery (≥ 1.5.1), purrr, stats, utils, dbplyr (≥ 2.5.0), sessioninfo, rlang, stringr, DBI, lifecycle, bit64
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), kableExtra, DT, googlesheets4, tibble, forcats, gh, SqlRender (≥ 1.6.0)
Published: 2024-04-04
Author: Louisa Smith ORCID iD [aut, cph], Rob Cavanaugh ORCID iD [aut, cre, cph]
Maintainer: Rob Cavanaugh <r.cavanaugh at northeastern.edu>
BugReports: https://github.com/roux-ohdsi/allofus/issues
License: MIT + file LICENSE
URL: https://roux-ohdsi.github.io/allofus/, https://github.com/roux-ohdsi/allofus
NeedsCompilation: no
Citation: allofus citation info
Materials: README NEWS
CRAN checks: allofus results

Documentation:

Reference manual: allofus.pdf
Vignettes: All of Us in R
Using ATLAS to create a cohort
Extracting All of Us survey and EHR data
Managing files on the workbench

Downloads:

Package source: allofus_1.1.0.tar.gz
Windows binaries: r-devel: allofus_1.1.0.zip, r-release: allofus_1.1.0.zip, r-oldrel: allofus_1.1.0.zip
macOS binaries: r-release (arm64): allofus_1.1.0.tgz, r-oldrel (arm64): allofus_1.1.0.tgz, r-release (x86_64): allofus_1.1.0.tgz
Old sources: allofus archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=allofus to link to this page.