Core Hunter 3

Version 3.2.3 (31/08/2023)

• Fixed broken package documentation due to Roxygen breaking change

Version 3.2.2 (02/05/2023)

• Standardized minimal Java version (>= 8) in system requirements.

Version 3.2.1 (16/04/2018)

• Added support for Java 9.

Version 3.2.0 (08/09/2017)

• New option to specify a set of always and/or never selected accessions.
• Added support for step-based in addition to time-based stop conditions.
• Using set.seed prior to executing Core Hunter, in combination with step-based stop conditions, now yields reproducible results.
• Largely reduced memory footprint of genotype and distance data.
• Default maximum time without improvement is now only applied in case no explicit stop conditions have been specified.
• Fixed issue when loading phenotype data with a single trait.

Version 3.1.0 (27/01/2017)

• More informative output when printing Core Hunter data objects (#19, #23).
• It is now required to explicitly specify the format when reading genotype data. Moreover, a warning is raised in case it seems that the wrong format may have been selected, through an inspection of the data that was read (#20).
• Fixed issues when reading files with single or double quoted values.
• Improved test coverage.

Version 3.0.1 (04/10/2016)

• The available Java version is now checked when installing or loading the package. Core Hunter requires Java 8 or higher.
  
• Package title and description have been updated.

Version 3.0.0 (03/10/2016)

• Initial release of Core Hunter 3 package