metaCluster: Metagenomic Clustering

Clustering in metagenomics is the process of grouping of microbial contigs in species specific bins. This package contains functions that extract genomic features from metagenome data, find the number of clusters for that given data and find the best clustering algorithm for binning.

Version: 0.1.1
Depends: R (≥ 3.6)
Imports: factoextra, cluster, dbscan, dplyr, seqinr, Biostrings
Published: 2024-06-20
DOI: 10.32614/CRAN.package.metaCluster
Author: Dipro Sinha [aut, cre], Sayanti Guha Majumdar [aut], Anu Sharma [aut], Dwijesh Chandra Mishra [aut], Md Yeasin [aut]
Maintainer: Dipro Sinha <diprosinha at>
License: GPL-3
NeedsCompilation: no
CRAN checks: metaCluster results


Reference manual: metaCluster.pdf


Package source: metaCluster_0.1.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): metaCluster_0.1.1.tgz, r-oldrel (arm64): metaCluster_0.1.1.tgz, r-release (x86_64): metaCluster_0.1.1.tgz, r-oldrel (x86_64): metaCluster_0.1.1.tgz
Old sources: metaCluster archive


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